Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908288.1_cds_XP_016458400.1_52033
CDS Infomation

[gene=LOC107782083] [db_xref=GeneID:107782083] [protein=tryptophan synthase beta chain 1-like] [protein_id=XP_016458400.1] [location=complement(join(62119..62300,62399..62493,63517..63950,64713..65072,65876..66163))] [gbkey=CDS]
Sequence

ATGGCATGTAACATCGAAGTTATTGTTCGACAAGCAAAAATTGCTGAACCAAGATTGTCA
TATAGCAGAAAATGGAAAGGAAAATTTGCTATATTTTCCGTAGCTACTGGCCCGAGCCGA
GTTACAGAGTTACCAGGGAAGCTGGTTTACCATGAAAAAAAGAGAGCAATATTTAGCAAT
GAAAAGTTTGGGATTTTTGGTGGAAAGTTCGTACCTGAGACGCTTATATCTTCTTTAACA
AAGCTTGACTACGAATTCAACTCTGCTTTGCATGACCCTCAGTTTCAGATGGTGCTGGGA
GTGGCACTAAGGGACTACGTAGGGCGTGAAACTCCTTTATACTTGGCTGAGAGACTAACA
GATAACTACAAGAGCAGAAATGGGGGAAAAGGGCCAGACCTATATCTAAAAAGGGAAGAT
CTGAACCATGTTGGAGCACACAAGATCAACAACGCTATTGCACAAACAATGTTGGCTAAA
CGCATGGACTGTAAAAATATCATAGCAGCCACCGGTGCTGGCCAACATGGCGTCGCGACG
GCGGCTGCCTGTGCTAAACTCTCATTGGAGTGTACTGTATTCATGGGAAGCTTAGATATG
GAGAGACAACCTTCTAATGTAATCTTGATGAAGCATCTTGGTGCAAAGGTGAAATCTGTA
AAAGGAAGTTTTAAAGATGCAGTATCGGAAGGCATTCGACATTGGGTTAACAACTTGGAG
ACAAGCTATTTCTTAGGAGGTGCAGCCATAGGACCACACCCATGTCCAACCATGGTTCGT
GAATTCCAATCAGTAATTGGAAAAGAAACGAGGAAACAAGCCATGGAAAAATGGGGTGGG
AAACCAGATGTGTTAGTGGCTTGTGTAGGTAGTGGCTCTAATGCGTTGGGTCTATTTCAT
GAATTTATTGAAGATAAAGATGTGAGGCTAATAGGAGTTGAAGCTGGTGGGGTTGGTCTT
GATACAGGTAAACACTCAGCAACTATGGCTAGAGGTCAAGTTGGGGTGTATCATGGTGCA
ATGAGCTATTTGTTACAAGATGATGAAGGACAAATTATTGAACCACACTCAATAGGTGTG
GGATTAGAGTACCCAGGTGTTAGCCCAGAGCTTAGCTTTCTAAAAGACACAGGGCGTGCA
GAGTTTTATACTGTCACAGATGAACAAGCCTTAGAAGCATATAAACGGTTGTGCAGGCTA
GAAGGGATATTCCCAGCCTTAGAAGCTTCACATGCACTTGCATTTCTCGACAGACTTTGC
CCTACTCTGGAGGATGGTGAGAAGGTGGTTGTTAATTTAAGCGGCCGCGGAGATAAGGAT
GCTGCCACAGTCTTTAATCATACAACAAAAAATGAATGA

Peptide Sequence

PEP ID

XP_016458400.1
PEP Infomation

PREDICTED: tryptophan synthase beta chain 1-like [Nicotiana tabacum]
Sequence

MACNIEVIVRQAKIAEPRLSYSRKWKGKFAIFSVATGPSRVTELPGKLVYHEKKRAIFSN
EKFGIFGGKFVPETLISSLTKLDYEFNSALHDPQFQMVLGVALRDYVGRETPLYLAERLT
DNYKSRNGGKGPDLYLKREDLNHVGAHKINNAIAQTMLAKRMDCKNIIAATGAGQHGVAT
AAACAKLSLECTVFMGSLDMERQPSNVILMKHLGAKVKSVKGSFKDAVSEGIRHWVNNLE
TSYFLGGAAIGPHPCPTMVREFQSVIGKETRKQAMEKWGGKPDVLVACVGSGSNALGLFH
EFIEDKDVRLIGVEAGGVGLDTGKHSATMARGQVGVYHGAMSYLLQDDEGQIIEPHSIGV
GLEYPGVSPELSFLKDTGRAEFYTVTDEQALEAYKRLCRLEGIFPALEASHALAFLDRLC
PTLEDGEKVVVNLSGRGDKDAATVFNHTTKNE

Transcript Sequence

Gene sequence data has not been registered.